The National Institute for Computational Sciences

Software

tophat

Category: APPLICATIONS > BIOINFORMATICS

Description

For more information see the tophat website

Description appeared on the tophat website : "TopHat is a fast splice junction mapper for RNA-Seq reads. It aligns RNA-Seq reads to mammalian-sized genomes using the ultra high-throughput short read aligner Bowtie, and then analyzes the mapping results to identify splice junctions between exons. "

Use

tophat is available as a module.

Once the tophat module has been loaded, its tools and libraries can be used.

Support

This package has the following support level : Supported

Available Versions

Version Available Builds
Other
2.1.1
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