The National Institute for Computational Sciences

Software

bedtools

Category: APPLICATIONS > BIOINFORMATICS

Description

For more information see the bedtools website

Description appeared on the bedtools website : "Collectively, the bedtools utilities are a swiss-army knife of tools for a wide-range of genomics analysis tasks. The most widely-used tools enable genome arithmetic: that is, set theory on the genome. For example, bedtools allows one to intersect, merge, count, complement, and shuffle genomic intervals from multiple files in widely-used genomic file formats such as BAM, BED, GFF/GTF, VCF. While each individual tool is designed to do a relatively simple task (e.g., intersect two interval files), quite sophisticated analyses can be conducted by combining multiple bedtools operations on the UNIX command line."

Use

bedtools is available as a module.

Once the bedtools module has been loaded, its executables can be used.

Support

This package has the following support level : Supported

Available Versions

Version Available Builds
Other
2.25.0
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